Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015906190.1_cds_XP_016456389.1_50228
CDS Infomation

[gene=LOC107780378] [db_xref=GeneID:107780378] [protein=formin-like protein 5] [protein_id=XP_016456389.1] [location=join(99378..99533,100283..100964,101065..101710,101800..101999,103131..103366,103901..104752)] [gbkey=CDS]
Sequence

ATGCTGATTCAAAAGGAAATGGGTGTAAGAGGAGTAGCCCAATTGTGTTTTTTTATCAGT
ACTCTTTTTATTATAGTAGCAGCAACTGATAGCAAGAAGTCGGTGGAACATTTGCTGGTC
AATCAAATCAGTTCCGGGGAGATCAACCAAGAATTGGCTGAACTGTTATGGTTGAACTGT
AGGCTAGAGTTATTACATGCTAATGGTGCTGTTGAAGATCTTGAAGAATCAAGTGGGAGC
CACAAAACCCTTTCTAATAGAAGATTGTCAACTAAAAATAAAGAGAAACATGTCAATATC
TTGCATCCACTCACTAAGGAAGCCCTTATGGGATGTATGGTGAAGAAAAATCTCCTGTTT
CTTATTTCCGGAGAGGAGAAGCATCCACCTACATGGTATACCAGGTGCACCGACTTTCTC
TTTTCTTGGTACAGTGCACCTACACGGCGTGAATTGCTTCAGTTTGGAGATGCTCCTGCT
CCTGCTCCTTCACCTAATTCAGCAAAAACTTCCAGTTCTGAAACTCCGAATTCTACGCCA
CCTGCCCGTCCTCCTTCAAAGCCATTTTTCCCTCGAGACTACAATGATTCAAGCAAAAGC
TCTGCACCTAGTGATCATTCTTCTACTAGTCAAAATGCTACTTCAGATGTACACTCAAAT
AAGCGAAAAAGCAACAGGAAAACAGTTCTTGTTGCAGTTCTTGTGACTGCTGCTGTCACA
TTTGTTGTTGTTGCACTCTTTTTTATATGCTATTGCAAGGTTTGTGGGGCTGGATCCAGA
AAAGGAAGGAATGACGAGAGGCCTCTTCTTAGCTTAAGCATGAGTGACTATTCTGTTGCT
TCATTACACAAGTCATCTGTTTTAGGAGCTTCGATGAGTAATGCTGGTAATCATTCAGTC
AGTGACAATTCCGACGATAAAATGGGTAAAAGTTTCTACATGGAGCCGAACGGTCTTAAT
GTTTCCAAAACTGAGATCCCTTTAGGAACTGTTACCGGCATTGCTGTGGCTGCAGCAGGG
GATTCTGCACAGGTACCGCCCGGAAGGATCGGGACACATGGACTGCCTCCGCTTAAACCT
CCTCCCGGTAGGGTGAATCCTTTTGAAGACCCACTGTCTCCTGCCAAGCCAGCCAATTTA
GCTGCTCCGCCGCCACCTCCACCACCACAGAAACCTACATCTAGCGGTCCACGCCCTCCT
GCACCAGGGGCTCCTCCACCACCACCTATACCAACTCGTGCGAAGGCTGGTCCTCGGCCA
CCACCACCTCCAGGTCCTGGTGCTACTCCACCTCGTCCTCCTCCCACGGGGTTGAAGCCG
CCTCGACCTTCACCTCTTGGATCAAATGCATCCTCTAGTGCTTCAGCTGAGGGATCAGGG
ACTGATGCTTCTAAAACTAAGCTAAAGCCTTTCTTCTGGGATAAGGTTCTAGCCAACCCT
GACCATTCAATGGTTTGGCATCAAATCAAATCAGGATCTTTCCAATTTGACGAAGAGATG
ATAGAGAGTCTCTTTGGATATGCTCCTGCTGACAAAAACAAGAATGGTTCAAAGGACTCT
ACGTCCCAAGATGCTTCCAAACAATTTGTTCAAATTATTGATCAAAGGAAGGCACAAAAT
TTATCTATTCTTCTTAAAGCCTTAAACGTGACAACTGAAGAAGTTTGTGATGCTCTCAAA
GAAGGAAATGAGCTGCCTTCTGAACTCCTTCAAACTTTGCTTAAGATGGCACCAACTACT
GATGAAGAATTGAAACTGAGGCTCTATAGTGGGGATCTCTCTCGGCTTGGGCCTGCGGAG
CGGTTCTTGAAAGTCTTGGTTGATATTCCATTTGCCTTCAAGAGGCTAGAATCCTTGCTT
TTTATGTGCAGTCTTCAGGAGGAGGCATCAATGGTTAAAGAATCATTTGCCACTTTGGAG
GCTGCTTGCACGGAACTCCGAAAAAGCAGGCTGTTTCACAAGCTCCTTGAGGCTGTTTTG
AAAACTGGCAATCGTATGAATGATGGAACATTTCGTGGTGGTGCTCAAGCATTTAAACTT
GACACGCTTCTGAAACTATCCGATGTAAAAGGGATAGATGGGAAAACTACATTGTTGCAT
TTTGTTGTTCAAGAGATAATCCGTTCAGAAGGTGTACGAGCTGCCCGTTCCAGGGAGCGA
GGCAGCATGTCGAGCATCAAGTCCGATGATCTACCCGAGGGTCAGTCTCAGGACTCGGAG
GAGTACTATCGAAGTACTGGTCTACAGGTCGTTTCAGGTTTGAGTAGTGAACTTGAAAAT
GTGAAAAAAGCTGCAATTTTAGATGCAGATAGCTTAACAGGCACAATGTCCAAGCTTGGT
CATGCACTAAAAAAATCACGGGATTTCCTAAATTCAGAAATGAAGAACGTAGATGATGAA
AACAGGTTTCACCAGACCCTAAAGAGTTTTGTGCAGAATGCTGAGGTTGACATCATGTGG
TTACTCGAGGAAGAAAAAAGAATTATGGCTCTAGTTAAGAGCACGGGTGATTATTTCCAC
GGAAATTCAGGGAAAGATGAAGGTTTGCGATTGTTTGTTATTGTTCGGGATTTTCTGGTA
ATTTTAGATAAGGTATGCATAGAGGTGAAAAATGCTCAGAGAAAGCTAAATGGCACGCCA
AAGAAAGAGAATTTGGCAGGTAAAACTTCAGAGTCCACCAATTTACCGTCCCTCGATCTC
CGTCAGAAGCTTTTTCCAGCTATCGCCGACCGGAGAATTGATGATTCTAGTTCAGATGAT
GATACTCCTTAA

Peptide Sequence

PEP ID

XP_016456389.1
PEP Infomation

PREDICTED: formin-like protein 5 [Nicotiana tabacum]
Sequence

MLIQKEMGVRGVAQLCFFISTLFIIVAATDSKKSVEHLLVNQISSGEINQELAELLWLNC
RLELLHANGAVEDLEESSGSHKTLSNRRLSTKNKEKHVNILHPLTKEALMGCMVKKNLLF
LISGEEKHPPTWYTRCTDFLFSWYSAPTRRELLQFGDAPAPAPSPNSAKTSSSETPNSTP
PARPPSKPFFPRDYNDSSKSSAPSDHSSTSQNATSDVHSNKRKSNRKTVLVAVLVTAAVT
FVVVALFFICYCKVCGAGSRKGRNDERPLLSLSMSDYSVASLHKSSVLGASMSNAGNHSV
SDNSDDKMGKSFYMEPNGLNVSKTEIPLGTVTGIAVAAAGDSAQVPPGRIGTHGLPPLKP
PPGRVNPFEDPLSPAKPANLAAPPPPPPPQKPTSSGPRPPAPGAPPPPPIPTRAKAGPRP
PPPPGPGATPPRPPPTGLKPPRPSPLGSNASSSASAEGSGTDASKTKLKPFFWDKVLANP
DHSMVWHQIKSGSFQFDEEMIESLFGYAPADKNKNGSKDSTSQDASKQFVQIIDQRKAQN
LSILLKALNVTTEEVCDALKEGNELPSELLQTLLKMAPTTDEELKLRLYSGDLSRLGPAE
RFLKVLVDIPFAFKRLESLLFMCSLQEEASMVKESFATLEAACTELRKSRLFHKLLEAVL
KTGNRMNDGTFRGGAQAFKLDTLLKLSDVKGIDGKTTLLHFVVQEIIRSEGVRAARSRER
GSMSSIKSDDLPEGQSQDSEEYYRSTGLQVVSGLSSELENVKKAAILDADSLTGTMSKLG
HALKKSRDFLNSEMKNVDDENRFHQTLKSFVQNAEVDIMWLLEEEKRIMALVKSTGDYFH
GNSGKDEGLRLFVIVRDFLVILDKVCIEVKNAQRKLNGTPKKENLAGKTSESTNLPSLDL
RQKLFPAIADRRIDDSSSDDDTP

Transcript Sequence

Gene sequence data has not been registered.